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Other comparative mapping tools:

Algorithm related links:

Mapping phase related links:



 Mauve: http://gel.ahabs.wisc.edu/mauve

UCSC Genome Browser: http://genome.ucsc.edu

Lagan: http://lagan.stanford.edu/lagan_web/index.shtml

MUMmer: http://mummer.sourceforge.net/

Global alignments tools:

 GLobal alignment related links:

 

 

http://www.hku.hk/bruhk/sgaln.html

http://www.biophys.kyoto-u.ac.jp/~katoh/programs/align/mafft/
http://lepo.it.da.ut.ee/~mremm/kurs/multali.htm
http://www.swbic.org/links/1.9.1.2.php
http://www.bioline.org.br/request?jb03127
http://sequencealignment.blogspot.com/
http://en.wikipedia.org/wiki/Sequence_alignment

Local alignment tools:

 Local alignment related links:

 

http://bioinfo.lifl.fr/yass/
http://www.hku.hk/bruhk/sgaln.html
http://www.bx.psu.edu/miller_lab/

http://lepo.it.da.ut.ee/~mremm/kurs/multali.htm
http://www.swbic.org/links/1.9.1.2.php
http://www.bioline.org.br/request?jb03127
http://sequencealignment.blogspot.com/
http://en.wikipedia.org/wiki/Sequence_alignment

http://www.ciri.upc.es/cela_pblade/BLAT.htm
http://www.ciri.upc.es/cela_pblade/BLAST.htm

Java related links:

 

Java latest version.

                        

eclipse home page
 

link for downloading eclipse:
Eclipse SDK 3.1.2

 


Solution to problem running SWT app from Jar


A very useful site including variant SWT examples:

http://www.java2s.com/ExampleCode/SWT-JFace-Eclipse/CatalogSWT-JFace-Eclipse.htm


   

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

 

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