A B C D E F G H I L M N O P R S T U V X Y

O

OKButton - Variable in class view.ParametersFrame

A button.

OKButton2 - Variable in class view.ParametersFrame

A button.

OnlyPreButton - Variable in class view.GRunTab

Check box, an advanced option so that the user can run preprocessing phase only.

open() - Method in class view.AddGenome

Shows the "add new genome" form, set objects bounderies,text and tooltips.

open() - Method in class view.Help

Sets the help text then shows the help dialog.

open() - Method in class view.OptionDialog

Views the option dialog window, and initiates the tabs with the appropriate text.

open() - Method in class view.RemoveGenome

Views the RemoveGenome new shell, and initiates it with combo and the apporpriate text/buttons.

OpenAbout() - Method in class view.Help

Sets the 'About' text then shows the dialog.

OptionDialog - Class in view

Title: Bioinformatics Project

OptionDialog(Shell, IDataHandler) - Constructor for class view.OptionDialog

C'tor, builds the option dialog view, constructs the tabs and sub components.

orthPerc - Variable in class model.Magic

Parameter: identifying orthologs.

orthPerc - Variable in class view.ParametersFrame

Parameters set by the user.

orthPerclabel - Variable in class view.ParametersFrame

Parameter label.

orthPerctext - Variable in class view.ParametersFrame

Text field for the parameter.

outDir - Variable in class view.GRunTab

The preprocessing/mapping output directory.

Output - Variable in class view.OptionDialog

Output directory, used in case user changes the output directory.

outputDir - Variable in class model.Magic

Output directory.

outputDirectory - Variable in class view.DataView

Output directory path, default is Magic root/Data.