A B C D E F G H I L M N O P R S T U V X Y

I

IDataHandler - Interface in controller

Title: Bioinformatics Project

IDataManager - Interface in model

Title: Bioinformatics Project

ImportedTableFile - Class in model

Title: Bioinformatics Project

ImportedTableFile(String) - Constructor for class model.ImportedTableFile

Opens a file

initComponents() - Method in class view.DataView

Inits the main tab and menu and components that will be use as containters.

initFrame() - Method in class view.DataView

Inits the main tab item component with buttons, sets menu details and listeners, "creat and shows GUI".

input - Variable in class view.OptionDialog

input directory, used in case user changes the input directory.

inputDir - Variable in class model.Magic

Input directory.

inputDir - Variable in class view.GRunTab

The preprocessing/mapping input directory.

inputDirectory - Variable in class view.DataView

Input directory path, default is Magic root/Data.

Instructions - Variable in class view.DataView

Instructions groups, meanwhile conatining a label.

IOitem - Variable in class view.OptionDialog

Input/Output tab item.

IOtab - Variable in class view.OptionDialog

Input/Output tab item control.

isCancelButton - Static variable in class view.AddGenome

Indicates wether the adding operation is canceled or confirmed.

isCancelButton - Variable in class view.OptionDialog

True if the operation has been canceled that way, no changes in the data base is needed.

isCancelButton - Variable in class view.RemoveGenome

True if the operation has been canceled that way, no changes in the data base is needed.

isCircular - Variable in class model.Genome

Genome circularity.

isCircular() - Method in class model.Genome

returns wether if the genome is circular or not.

isComplex - Variable in class controller.DataHandler

True if the language encoding is Right-to-Left

isComplex() - Method in class controller.DataHandler

isComplex() - Method in interface controller.IDataHandler

Returns true if the language encoding is Right-to-left.

isDisposed() - Method in class view.SWTTable

Returns true if the table is disposed.

IsFileImported() - Method in class model.ImportedTableFile

Returns a flag that indicates whether the file has been imported into lines-vector

isOperationCanceled() - Method in class view.AddGenome

Returns true if the user has canceld the adding operation.

isOperationCanceled() - Method in class view.OptionDialog

Indicates wether the operation has been canceled or not.

isOperationCanceled() - Method in class view.RemoveGenome

Indicates wether the operation has been canceled or not.

isParaVisible - Variable in class view.GRunTab

A boolean value indicating if the parameters tab is visible.

isParaVisible - Variable in class view.History

Indicates wether the parameters tables are visible or not.

item1 - Variable in class view.ParametersFrame

Preprocessing parametrs tab item.

item2 - Variable in class view.ParametersFrame

mapping parametrs tab item.