A B C D E F G H I L M N O P R S T U V X Y

P

PaintChart - Class in view

Title: Bioinformatics Project

PaintChart(Composite, Rectangle) - Constructor for class view.PaintChart

C'tor, initiates the chart variables.

PaintLineInChart(Line, long, long) - Method in class view.PaintChart

Paints a single given line in the chart, its "resizes" the line according to the chart scale (genomes length).

paraitem - Variable in class view.DataView

Parameters tab item.

ParaMapitem - Variable in class view.GRunTab

Parameters tab mapping item.

ParaMapitem - Variable in class view.History

Preprocessing tab item.

ParametersFrame - Class in view

Title: Bioinformatics Project

ParametersFrame(CTabFolder, CTabItem, Shell, IDataHandler) - Constructor for class view.ParametersFrame

C'tor, initiates parameters tab with the default groups/texts/labels and contructs the buttons.

ParaPreitem - Variable in class view.GRunTab

Parameters tab preprocessing item.

ParaTab - Variable in class view.GRunTab

Tab holding the preprocessing parameters.

paratab - Variable in class view.ParametersFrame

Parameters tab item control.

parent - Variable in class view.AddGenome

The main display from Data view.

parent - Variable in class view.Help

Data view shell.

parent - Variable in class view.OptionDialog

DataView shell, in order to take control of the view.

parent - Variable in class view.RemoveGenome

DataView shell, in order to take control of the view.

PB - Variable in class view.GRunTab

The progress bar, visible only when running a process.

PChart - Variable in class view.DataView

An object building and viewing the chart canvas.

Per1Label - Variable in class view.ParametersFrame

"%" label.

Per2Label - Variable in class view.ParametersFrame

"%" label.

PFrame - Variable in class view.DataView

Parameters tab object.

Plasmid_num - Variable in class model.Genome

Genome plasmid number.

pow(int, int) - Method in class view.PaintChart

Calculates regular power function : i^j.

preHistory - Variable in class view.History

Pre processing history table.

PreListener - Variable in class view.GRunTab

A listener for the go button that runs the preprocessing phase.

PrePComp - Variable in class view.GRunTab

The preprocessing parameters tab control.

PrePComp - Variable in class view.History

The control of the preprocessing tab item.

PrintMessageToScreen(int, boolean) - Static method in class view.GRunTab

Opens an error message for the user in case mapping process fails , it also specifies the faliure reason.

prop - Variable in class model.Genome

Genome prop file path.

protein_gene_num - Variable in class model.Genome

Genome protein gene number.

Pshell - Variable in class view.ParametersFrame

DataView shell.